澳门金莎娱乐网站,官方澳门金莎娱乐网站

柳军涛
柳军涛

1988年11月生;讲师;硕士生导师;博士 
研究领域:生物信息学;组合优化

联系方式
地址:山东省威海市文化西路180号,澳门金莎娱乐网站(威海)澳门金莎娱乐网站院
邮编:264209 
电子邮件:juntao@sdu.edu.cn;juntaosdu@126.com
行政职务与学术兼职
1. Frontiers in Genetics杂志:Review Editor;
2. 多个学术杂志(如:Bioinformatics, BMC Genomics, Applied Spectroscopy, Plos One等)的审稿人;
访问经历
2015.10 - 2016.10,美国加州大学河滨分校,计算机科学与工程系,联合培养博士 
学习经历
2017.6 - 2019.3,博士后,澳门金莎娱乐网站
2012.09 - 2017.06,澳门金莎娱乐网站数学学院,运筹学与控制论,博士学位 
2008.09 - 2012.06,澳门金莎娱乐网站数学学院,信息与计算科学,学士学位
工作经历
2017.07 - 至今,澳门金莎娱乐网站(威海)澳门金莎娱乐网站院
2019.03 - 2020.03,挂职澳门金莎娱乐网站(威海)人事处副处长
项目
1.基于参考基因组的转录组拼接算法研究及其在癌症中的应用,国家自然科学基金青年基金(项目号:61801265),25万,主持,2019/01-2021/12;
2.基于高通量RNA-seq数据的转录组拼接算法设计与应用,山东省自然科学基金培养基金(项目号:ZR2018PA001),5万,主持,2018/03-2020/06;
3.基于二代RNA-seq数据转录组拼接的理论研究与算法设计,中国博士后科学基金面上资助(项目号:2018M632659),5万,主持(已结题);
4.基于图与组合优化的生物数据和网络数据挖掘算法研究,国家自然科学基金委重点项目(项目号:11931008),10万,子课题负责人,2020/01-2024/12;
5.澳门金莎娱乐网站“青年学者未来计划”基金,50万,2020/01-2024/12;
论著
14. Ting Yu, Zengchao Mu, Zhaoyuan Fang, Xiaoping Liu, Xin Gao, Juntao Liu* (通讯作者 2020.8.17), TransBorrow: Genome-guided transcriptome assembly by borrowing assemblies from different assemblers. Genome Research, 30(8). (SCI, 中科院1区Top,IF:11.093)
13. Xiangyu Liu, Di Li, Juntao Liu, Zhengchang Su, Guojun Li (2020.7.11) RecBic: a fast and accurate algorithm recognizing trend-preserving biclusters. Bioinformatics. (SCI, 中科院1区Top,IF:5.61)
12.Ting Yu#, Juntao Liu# (共同一作), Xin Gao, Guojun Li (2020.1.27) iPAC: a genome-guided assembler of isoforms via phasing and combing paths. Bioinformatics, doi: 10.1093/bioinformatics/btaa052. (SCI, 中科院1区Top,IF:4.531)
11.Zengchao Mu, Ting Yu, Enfeng Qi, Juntao Liu* (通讯作者), Guojun Li (2019.06) DCGR: Feature extractions from protein sequences based on CGR via remodeling multiple information. BMC Bioinformatics, 20:351. (SCI, 中科院2区,IF:2.511)
10. Juntao Liu, Ting Yu, Zengchao Mu, Guojun Li (2019.4.9) TransLiG: a de novo transcriptome assembler that uses line graph iteration.?Genome Biology, 28(81). (SCI, 中科院1区Top, IF:14.028)
9. Juntao Liu, Xiangyu Liu, Xianwen Ren, Guojun Li (2019.3.31) scRNAss: a single-cell RNA-seq assembler via imputing dropouts and combing junctions. Bioinformatics. (SCI, 中科院1区Top,IF:4.531) 
8. Juntao Liu, Ting Yu, Tao Jiang, Guojun Li (2016.10.19) TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs. Genome Biology, 17(213). (SCI, 中科院1区Top, IF:14.028)
7. Juntao Liu, Guojun Li, Zheng Chang, Ting Yu, Bingqiang Liu, Rick McMullen, Pengyin Cheng, Xiuzhen Huang (2016.2.19) BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data. Plos Computational Biology, 12(2): e1004772. (SCI, 中科院1区Top, IF:4.428)
6. Juntao Liu, Jianyang Sun, Xiuzhen Huang, Guojun Li, Bingqiang Liu (2015.7) Goldindec: A Novel Algorithm for Raman Spectrum Baseline Correction. Applied Spectroscopy, 69(7): 834. (SCI, 2区, IF:1.872)
5. Juntao Liu, Xiaoyun Duan, Jianyang Sun, Yanbin Yin, Guojun Li, Lushan Wang, Bingqiang Liu (2013.11.20) Bi-Factor Analysis Based on Noise-Reduction (BIFANR): A New Algorithm for Detecting Coevolving Amino Acid Sites in Proteins. Plos One, 8(11):e79764. (SCI, 2区, IF:2.766)
4. Bo Gao, Yue Zhao, Yang Li,?Juntao Liu, Lushan Wang, Guojun Li, Zhengchang Su (2018.12) Prediction of Driver Modules via Balancing Exclusive Coverages of Mutations in Cancer Samples.?Advanced Science. (SCI, 中科院1区Top,IF:15.804)
3. Ashraful Arefeen, Juntao Liu, Xinshu Xiao, Tao Jiang (2018.2.23) TAPAS: Tool for Alternative Polyadenylation Site Analysis. Bioinformatics. (SCI, 中科院1区Top,IF:4.531)
2. Bo Gao, Guojun Li, Juntao Liu, Yang Li, Xiuzhen Huang (2017.3.21) Identification of driver modules in pan-cancer via coordinating coverage and exclusivity. Oncotarget, doi: 10.18632/oncotarget.16433. (SCI, 1区,IF:5.168)
1. Zheng Chang, Guojun Li, Juntao Liu, Yu Zhang, Cody Ashby, Deli Liu, Carole L. Cramer, Xiuzhen Huang (2015.2) Bridger: A new framework for de novo transcriptome assembly using RNA-seq data. Genome Biology. (SCI, 中科院1区Top, IF:14.028)
在读研究生(以入学时间为序)
王春祥(硕士)
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